Summary of Practical Molecular Biology Software

Summary of Practical Molecular Biology Software

BioEdit

A professional and powerful molecular biology application software that can complete all routine analysis operations of nucleic acid sequences and protein sequences, such as sequence alignment, sequence retrieval, primer design, and phylogenetic analysis.

ChromasA simple and practical gene sequencing peak graph viewing software that allows users to monitor and measure changes in gene data. The software uses peak graph conversion mode to visually analyze points, lines, and regions of gene changes, effectively detecting sequence changes in gene data.

DNAMAN6.0-Raindy

A highly integrated comprehensive software for molecular biology. The software, DNAMAN, can be used for multiple sequence alignment, PCR primer design, restriction enzyme analysis, and other aspects, almost encompassing all the daily analysis of nucleic acid and protein sequences in biology.

DNASTAR.Lasergene.v7.1

Comprehensive biomedical software used for DNA and protein sequence analysis, overlap group splicing, and gene engineering management. It includes 7 modules: SeqBuilder - visualization and sequence editing, SeqMan Pro - sequence assembly and SNP detection, MegAlign - sequence alignment, PrimerSelect - oligo primer design, Protean - protein structure analysis and prediction, GeneQuest - gene search, EditSeq - import special file tools.

Winplas2.7

A very easy-to-use and powerful plasmid drawing software, which belongs to professional biology software. The software has a small size, is easy to use, and can be operated in just two minutes. It is mainly used for plasmid illustration operations in various papers and tutorials.

SimVector 4.6

An excellent tool for DNA analysis and plasmid diagram drawing. It can design various vector diagrams, plasmid diagrams, vector maps, and sequence diagrams, supporting automatic generation of high-quality publication-ready vector maps, thereby helping biologists with experiment design and analysis.

Vector NTI

A sequence assembly and analysis software developed by Invitrogen, which includes functions such as alignment display settings, simulated electrophoresis, GenomBench analysis, output query molecules, and molecular sequence operations, providing a new solution for sequence assembly and analysis.

SnapGene DNA

A powerful DNA sequence analysis software that helps users analyze and modify DNA maps and export them to other formats. It supports analysis of plasmid components such as restriction sites, tags, promoters, terminators, and replicon, generating detailed DNA sequence files.

QuantiScan v3.0

A simple-to-use and function-specific gel scanning and analysis software. QuantiScan can also help you analyze and scan a variety of material components.

Primer Premier

A practical primer design software, which includes four major functional options: primer design, analysis of restriction endonuclease sites, and search for DNA motifs.

Bandscan

It is a commonly used gel image analysis software that can be used for relative quantitative analysis of agarose gel electrophoresis, SDS-PAGE, and Western Blot, Northern Blot, EMSA, and other transfers to membranes.

PyMOL

PyMOL is an open-source molecular 3D structure visualization software developed in Python language, which is widely used in scientific research and education. PyMOL is suitable for creating high-quality 3D structural images of small molecules or large biomolecules (especially proteins).

RNAdraw

RNAdraw is an RNA secondary structure analysis software. It supports RNA secondary structure calculation, sequence analysis, sequence filtering, and other functions. It organizes all your RNA data files in an easy-to-use way and is a software for data processing with multi-document window opening.

PDQuest

PDQuest software has powerful comparative analysis capabilities, especially designed for analyzing multiple gels simultaneously. This advanced analysis tool can reveal subtle differences between analyzed gels (for example, studying the effects of variables such as heat shock, culture medium, dose response, and time course).